Team

The Team in 2020

  • Marie-Dominique Devignes (CNRS researcher ; Team Leader since September 2019) — complex network analysis; biological data mining; knowledge discovery in biological databases
    marie-dominique.devignes AT loria.fr  |  +33 3 83 59 20 65
  • Malika Smail-Tabbone (MC, HDR, Université de Lorraine) — Data integration and analysis; knowledge discovery from biomedical data; graph and relational data mining.                                                                       malika.smail AT loria.fr
  • Bernard Maigret (Emeritus CNRS researcher) — molecular dynamics simulation; virtual drug screening
    maigret AT loria.fr
  • Sabeur Aridhi (MC, TELECOM Nancy) — big data; artificial intelligence; cloud computing; bioinformatics
  • Isaure Chauvot de Beauchêne (CNRS researcher) — modeling proteins and their complexes, especially with nucleic acids.
  • Dominique Mias-Lucquin (Post-Doc Fellow) — Modelling ICE St3 relaxase-ssDNA interactions
    dominique.mias-lucquin AT loria.fr
  • Camille Besançon (Post-Doc Fellow) — Modelling long non coding RNA (ANRIL) interaction with regulatory proteins
    camille.besancon AT loria.fr
  • Kamrul Islam (PhD student) — Distributed link prediction in large complex graphs: application to biomolecule interactions
    kamrul.islam AT loria.fr
  • Diego Amaya Ramirez (PhD student) — 3D-modeling of HLA antigens – Structure-based study of donor-receptor compatibility
    diego.amaya-ramirez AT inria.fr
  • Anna Kravchenko (PhD student) — Improving methods to dock RNA with proteins
    anna.kravchenko AT loria.fr
  • Hrishikesh Dhondge (PhD student) — Data analysis on RNA recognition motifs (RRMs)
    hrishikesh.dhondge AT loria.fr
  • Wissem Inoubli (PhD student, Tunis University) — Graph mining of distributed and dynamic graphs
    wissem.inoubli AT loria.fr
  • Kevin Dalleau (PhD student) — Extremely randomized trees for similarity computation; graph clustering
    kevin.dalleau AT loria.fr
  • Bishnu Sarker (PhD student) — Developing distributed graph-based approaches for large-scale protein function annotation and knowledge discovery
    bushnu.sarker AT inria.fr
  • Antoine Moniot (PhD student) — Modeling protein / nucleic acid complexes by combinatorial structural fragment assembly
    antoine.moniot AT loria.fr
  • Athénaïs Vaginay (PhD student) — Model Construction and Analysis of Biological Networks: Application to Perturbed Networks in Diseases
    athenais.vaginay AT loria.fr
  • Isabelle Herlich (Inria Team Assistant)
    isabelle.herlich AT inria.fr  |  +33 3 83 59 20 72
  • Antoinette Courrier (CNRS Team Assistant)
    antoinette.courrier AT loria.fr  |  +33 3 83 59 20 09
  • Annick Jacquot (CNRS Team Assistant)
    annick.jacquot AT loria.fr  |  73016 (internal)

Former Team Members

  • Emmanuel Bresso (Research Engineer) — Fight Heart Failure ANR project
  • Philippe Noel (Bioinformatics Master-2 Inria Apprentice) — Design of Inhibitors of the Transfer of Antimicrobial Resistance – (LUE project « CITRAM »)
  • Maria Elisa Ruiz-Echartea (PhD student) — multi-component protein assembly
  • Claire Lacomblez (Engineer) — Design and Development of a Database System to Study the Effects of Epleronone on Heart Failure and Obesity (ANR project « FIGHT-HF »)
  • Dave Ritchie (Inria researcher; Capsid team founder) — protein docking; protein interactions; protein structure alignment
    Dave Ritchie passed away on September, 15, 2019 (Obituary)
  • Gabin Personeni (PhD student) — exploration of linked open data in view of knowledge discovery
  • Seyed Ziaeddin Alborzi (PhD student) — automatic protein domain function annotation
  • Antoine Chemardin (Development Engineer) — Galaxy structural bioinformatics platform