Computational Algorithms for Protein Structures and Interactions

CAPSID Team — Inria, CNRS, University of Lorraine



LORIA

INRIA

CNRS

Univeristè de Lorraine

The Team

  • Dave Ritchie (Inria researcher; team leader) — protein docking; protein interactions; protein structure alignment
    dave.ritchie AT inria.fr  |  +33 3 83 59 30 45

  • Marie-Dominique Devignes (CNRS researcher) — biological data mining; knowledge discovery in biological databases
    marie-dominique.devignes AT loria.fr  |  +33 3 83 59 20 65

  • Malika Smail-Tabbone (MdC (HDR) Nancy TELECOM) — biomedical data mining; knowledge discovery in biological databases
    malika.smail AT loria.fr  |  +33 3 83 59 20 65

  • Bernard Maigret (Emeritus CNRS researcher) — molecular dynamics simulation; virtual drug screening
    maigret AT loria.fr  |  +33 3 54 95 85 93

  • Sabeur Aridhi (MdC Nancy TELECOM) — big data; artificial intelligence; cloud computing; bioinformatics

  • Isaure Chauvot de Beauchêne (CNRS researcher) — modeling protein-RNA complexes

  • Gabin Personeni (PhD student) — exploration of linked open data in view of knowledge discovery
    gabin.personeni AT loria.fr  |  (internal) 72055

  • Maria Elisa Ruiz-Echartea (PhD student) — multi-component protein assembly
    maria-elisa.ruiz-echartea AT inria.fr

  • Bishnu Sarker (PhD student) — Developing distributed graph-based approaches for large-scale protein function annotation and knowledge discovery
    bushnu.sarker AT inria.fr

  • Emmanuel Bresso (Research Engineer) — Fight Heart Failure project (ANR "FIGHT-HF")
    emmanuel.bresso AT loria.fr

  • Claire Lacomblez (Engineer) — Design and Development of a Database System to Study the Effects of Epleronone on Heart Failure and Obesity (ANR project "FIGHT-HF")
    claire.lacomblez AT loria.fr

  • Philippe Noel (Bioinformatics Master-2 Inria Apprentice) — Design of Inhibitors of the Transfer of Antimicrobial Resistance - (LUE project "CITRAM")
    philippe.noel AT inria.fr

  • Aichata Niang (Bioinformatics Master-2) — Modeling and Molecular Dynamics of a Mutated Galactosyl Transferase to Find Synthetic Therapeutic Substrates - (PEPS project "DynaGalT")
    aichata.niang AT loria.fr

  • Isabelle Herlich (Inria Team Assistant)
    isabelle.herlich AT inria.fr  |  +33 3 83 59 20 72

  • Antoinette Courrier (CNRS Team Assistant)
    antoinette.courrier AT loria.fr  |  +33 3 83 59 20 09

Former Team Members

  • Seyed Ziaeddin Alborzi (PhD student) — automatic protein domain function annotation

  • Antoine Chemardin (Development Engineer) — Galaxy structural bioinformatics platform